Miyakogusa Predicted Gene

Lj6g3v1464010.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL D7SYE1_VITVI 823 81.2 88.7 (tr|D7SYE1) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g02310 PE=4 SV=1
TAIR_pep AT4G15900.1 759 75.2 85.1 | Symbols: PRL1 | pleiotropic regulatory locus 1 | chr4:9023775-9027443 FORWARD LENGTH=486
Medicago Medtr2g436510.1 875 86.9 92.1 | PP1/PP2A phosphatase pleiotropic regulator PRL1 | HC | chr2:14198159-14190457 | 20130731
Soybean Glyma15g15960.1 880 87.8 92.0  
LJGI gnl|LJGI|TC70560 1110 100.0 100.0 similar to UniRef100_A7Q8D0 Cluster: Chromosome chr5 scaffold_64, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_64, whole genome shotgun sequence - Vitis vinifera (Grape), partial (82%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1464010.1 length: 480 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 0.014 160-198
203-240
245-282
288-324
330-360
429-457
HMMSmart SM00320 WD40 0.19 159-198
201-240
243-282
285-324
327-365
368-407
419-457
ProfileScan PS50082 WD_REPEATS_2 15.555 166-207
208-249
250-291
292-333
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 3e-77 148-457
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 55.524 166-466
superfamily SSF50978 WD40 1.6e-71 155-457
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 269-283
311-325
IPR020472 G-protein beta WD-40 repeat
FPrintScan PR00320 GPROTEINBRPT 7.6e-08 185-199
269-283
311-325
no_ID  
HMMPanther PTHR19923 WD40 7.8e-259 6-480
Seg seg seg NA 11-21
Wolf-PSORT
Lj6g3v1464010.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1464010.1