Miyakogusa Predicted Gene

Lj6g3v1463990.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L0Y5_SOYBN 657 79.1 89.6 (tr|I1L0Y5) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G50990.1 448 52.8 72.6 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:20739453-20741281 FORWARD LENGTH=534
Medicago Medtr2g436470.1 692 83.2 92.4 | pentatricopeptide (PPR) repeat protein | HC | chr2:14170762-14173219 | 20130731
Soybean Glyma09g04890.1 658 79.1 89.6  
LJGI gnl|LJGI|DC593204 60.0 87.9 87.9 weakly similar to UniRef100_A7PEW9 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1463990.2 length: 396 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0044 55-80
256-280
HMMPfam PF13041 PPR_2 6.2e-08 81-129
183-229
HMMTigr TIGR00756 PPR: 1.3e-05 83-116
185-217
ProfileScan PS51375 PPR 5.097 81-115
50-80
116-150
182-216
151-181
217-247
253-283
316-350
285-315
no_ID  
HMMPanther PTHR24015 FAMILY 1.3e-155 23-394
HMMPanther PTHR24015:SF146SUBFAMILY NOT 1.3e-155 23-394
Wolf-PSORT
Lj6g3v1463990.2	cyto 8, chlo 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1463990.2