Miyakogusa Predicted Gene

Lj6g3v1463990.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L0Y5_SOYBN 698 75.3 86.1 (tr|I1L0Y5) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G50990.1 463 52.0 72.2 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:20739453-20741281 FORWARD LENGTH=534
Medicago Medtr2g436470.1 709 82.0 91.9 | pentatricopeptide (PPR) repeat protein | HC | chr2:14170762-14173219 | 20130731
Soybean Glyma09g04890.1 676 78.4 88.9  
LJGI gnl|LJGI|DC593204 60.0 87.9 87.9 weakly similar to UniRef100_A7PEW9 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1463990.1 length: 451 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0051 110-135
311-335
HMMPfam PF13041 PPR_2 7.4e-08 136-184
238-284
HMMTigr TIGR00756 PPR: 1.6e-05 138-171
240-272
ProfileScan PS51375 PPR 5.097 136-170
105-135
171-205
237-271
206-236
272-302
308-338
371-405
340-370
no_ID  
HMMPanther PTHR24015 FAMILY 1.4e-154 1-449
HMMPanther PTHR24015:SF146SUBFAMILY NOT 1.4e-154 1-449
Wolf-PSORT
Lj6g3v1463990.1	chlo 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1463990.1