Miyakogusa Predicted Gene

Lj6g3v1444590.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L2J4_MEDTR 164 93.8 97.5 (tr|G7L2J4) 40S ribosomal protein S21 OS=Medicago truncatula GN=MTR_7g076530 PE=3 SV=1
TAIR_pep AT5G27700.1 152 80.5 93.9 | Symbols: | Ribosomal protein S21e | chr5:9807541-9808048 REVERSE LENGTH=82
Medicago Medtr7g076530.1 164 93.8 97.5 | 40S ribosomal S21-like protein | HC | chr7:28815298-28816510 | 20130731
Soybean Glyma15g15800.1 161 90.1 97.5  
LJGI gnl|LJGI|TC75455 494 100.0 100.0 homologue to UniRef100_Q2HVJ1 Cluster: Ribosomal protein S21e; n=1; Medicago truncatula|Rep: Ribosomal protein S21e - Medicago truncatula (Barrel medic), partial (77%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1444590.1 length: 82 aa.
IPR001931 Ribosomal protein S21e
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
BlastProDom PD006584 RS21B_ARATH_Q9M337; 8e-19 26-74
HMMPIR PIRSF002148 Ribosomal 1.4e-51 1-82
HMMPanther PTHR10442 40S 2.1e-48 1-82
HMMPfam PF01249 Ribosomal_S21e 1.7e-39 1-77
IPR018279 Ribosomal protein S21e, conserved site
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
PatternScan PS00996 RIBOSOMAL_S21E NA 11-19
Wolf-PSORT
Lj6g3v1444590.1	mito 8, chlo 3, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1444590.1