Miyakogusa Predicted Gene
- Lj6g3v1412720.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MGU8_SOYBN |
126 |
56.2 |
70.1 |
(tr|I1MGU8) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G20040.1 |
84.7 |
57.0 |
72.2 |
| Symbols: | Pectin lyase-like superfamily protein | chr4:10847348-10848963 REVERSE LENGTH=483 |
| Medicago |
Medtr2g035790.1 |
124 |
52.7 |
66.7 |
| polygalacturonase QRT3-like protein | HC | chr2:15178610-15181077 | 20130731 |
| Soybean |
Glyma15g16930.1 |
126 |
56.2 |
70.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1412720.1 |
length: 185 aa. |
| IPR011050 |
Pectin lyase fold/virulence factor |
| method |
AccNumber |
shortName |
E-value |
location |
| superfamily |
SSF51126 |
Pectin |
1.1e-07 |
24-122 |
| IPR012334 |
Pectin lyase fold |
| Gene3D |
G3DSA:2.160.20.10 |
no description |
6.2e-06 |
40-123 |
- Wolf-PSORT
Lj6g3v1412720.1 cyto 4, E.R. 3, cyto_nucl 3, nucl 2, vacu 2, golg 2, cyto_pero 2, E.R._plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1412720.1 |
|