Miyakogusa Predicted Gene
- Lj6g3v1392580.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T4S6_LOTJA |
520 |
99.6 |
99.6 |
(tr|I3T4S6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT4G15130.1 |
429 |
83.1 |
92.6 |
| Symbols: ATCCT2, CCT2 | phosphorylcholine cytidylyltransferase2 | chr4:8637793-8639388 FORWARD LENGTH=304 |
| Medicago |
Medtr2g035810.1 |
492 |
88.9 |
93.9 |
| choline-phosphate cytidylyltransferase | HC | chr2:15192725-15187789 | 20130731 |
| Soybean |
Glyma15g16950.1 |
480 |
87.6 |
93.2 |
|
| LJGI |
gnl|LJGI|TC68624 |
1560 |
100.0 |
100.0 |
homologue to UniRef100_P93470 Cluster: Cholinephosphate cytidylyltransferase; n=1; Pisum sativum|Rep: Cholinephosphate cytidylyltransferase - Pisum sativum (Garden pea), partial (97%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1392580.1 |
length: 283 aa. |
| IPR004821 |
Cytidyltransferase-like domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0009058 |
biosynthetic process |
|
|
| HMMPfam |
PF01467 |
CTP_transf_2 |
2e-24 |
19-148 |
| HMMTigr |
TIGR00125 |
cyt_tran_rel: |
4e-21 |
17-84 |
| IPR014729 |
Rossmann-like alpha/beta/alpha sandwich fold |
| Gene3D |
G3DSA:3.40.50.620 |
no description |
4.5e-40 |
17-152 |
| no_ID |
|
| HMMPanther |
PTHR10739 |
CYTIDYLYLTRANSFERASE |
1e-141 |
15-283 |
| HMMPanther |
PTHR10739:SF13 |
CHOLINE-PHOSPHATE |
1e-141 |
15-283 |
| Seg |
seg |
seg |
NA |
263-283 |
| superfamily |
SSF52374 |
Nucleotidylyl |
7.5e-29 |
15-150 |
- Wolf-PSORT
Lj6g3v1392580.1 nucl 6, cyto 5, mito 1, plas 1, cysk 1, cysk_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1392580.1 |
|