Miyakogusa Predicted Gene

Lj6g3v1392470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LBV4_SOYBN 1022 82.8 90.3 (tr|K7LBV4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G20090.1 777 62.3 77.3 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) superfamily protein | chr4:10868400-10870382 REVERSE LENGTH=660
Medicago Medtr2g035450.1 1010 80.1 88.4 | PPR containing plant-like protein | HC | chr2:15110685-15106845 | 20130731
Soybean Glyma09g05570.1 1007 82.7 90.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1392470.1 length: 645 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 1.2e-08 107-128
350-379
HMMPfam PF12854 PPR_1 4.1e-08 238-270
HMMPfam PF13041 PPR_2 1.8e-10 171-220
276-325
381-428
452-500
523-570
HMMTigr TIGR00756 PPR: 1e-06 175-208
209-242
245-278
279-312
349-383
384-417
419-452
454-488
489-517
527-559
ProfileScan PS51375 PPR 11.422 136-171
100-130
65-99
172-206
207-241
242-276
277-311
347-381
312-346
382-416
452-486
417-451
487-521
524-558
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.7e-09 521-547
no_ID  
Coil coil coiled-coil NA 75-103
HMMPanther PTHR24015 FAMILY 1e-170 14-632
HMMPanther PTHR24015:SF0 SUBFAMILY 1e-170 14-632
Seg seg seg NA 8-22
26-48
superfamily SSF81901 HCP-like 2.1e-07 358-572
Wolf-PSORT
Lj6g3v1392470.1	mito 6.5, chlo 4, cyto_mito 4, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1392470.1