Miyakogusa Predicted Gene
- Lj6g3v1371860.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3RZN6_LOTJA |
768 |
100.0 |
100.0 |
(tr|I3RZN6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G50140.1 |
228 |
33.1 |
52.3 |
| Symbols: | Plant protein of unknown function (DUF247) | chr3:18592472-18594562 REVERSE LENGTH=539 |
| Medicago |
Medtr2g036320.1 |
596 |
61.3 |
76.2 |
| UPF0481 plant-like protein | HC | chr2:15734831-15733115 | 20130731 |
| Soybean |
Glyma15g17300.1 |
603 |
74.8 |
85.5 |
|
| LJGI |
gnl|LJGI|TC76688 |
2266 |
99.9 |
99.9 |
similar to UniRef100_A7QTC1 Cluster: Chromosome chr1 scaffold_166, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_166, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1371860.1 |
length: 512 aa. |
| IPR004158 |
Protein of unknown function DUF247, plant |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03140 |
DUF247 |
2e-98 |
55-446 |
| no_ID |
|
| HMMPanther |
PTHR31549 |
FAMILY |
1.3e-99 |
15-462 |
- Wolf-PSORT
Lj6g3v1371860.1 plas 4, mito 3.5, chlo 3, nucl_plas 3, cyto_mito 2.5, golg_plas 2.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1371860.1 |
|