| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7IG77_MEDTR | 1219 | 72.2 | 79.0 | (tr|G7IG77) TBC1 domain family member-like protein OS=Medicago truncatula GN=MTR_2g037930 PE=4 SV=1 |
| TAIR_pep | AT4G29950.1 | 764 | 51.5 | 62.5 | | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr4:14657464-14660370 FORWARD LENGTH=828 |
| Medicago | Medtr2g037930.1 | 1219 | 72.2 | 79.0 | | Ypt/Rab-GAP domain of gyp1p superfamily protein | HC | chr2:16450205-16455298 | 20130731 |
| Soybean | Glyma15g17870.1 | 1136 | 70.6 | 77.2 | |
| LJGI | gnl|LJGI|TC71267 | 1403 | 99.3 | 99.3 | similar to UniRef100_A7QXM9 Cluster: Chromosome undetermined scaffold_226, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_226, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%) |
| Lj6g3v1333120.1 | length: 888 aa. | |||
| IPR000195 | Rab-GTPase-TBC domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005097 | Rab GTPase activator activity | ||
| Cellular Component | GO:0005622 | intracellular | ||
| Biological Process | GO:0032313 | regulation of Rab GTPase activity | ||
| HMMPfam | PF00566 | RabGAP-TBC | 6.5e-11 | 113-175 267-367 |
| HMMSmart | SM00164 | Domain | 1.5e-29 | 17-414 |
| ProfileScan | PS50086 | TBC_RABGAP | 24.773 | 30-368 |
| superfamily | SSF47923 | Ypt/Rab-GAP | 5.4e-28 | 303-445 35-328 |
| no_ID | ||||
| Gene3D | G3DSA:1.10.8.270 | no description | 1.3e-20 | 267-280 |
| HMMPanther | PTHR22957 | TBC1 | 2.2e-190 | 28-595 |
| HMMPanther | PTHR22957:SF24 | MICROTUBULE-ASSOCIATED | 2.2e-190 | 28-595 |
| Seg | seg | seg | NA | 4-23 66-77 316-329 721-739 |
Lj6g3v1333120.1 nucl 12, mito 1, plas 1, mito_plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj6g3v1333120.1 |