Miyakogusa Predicted Gene

Lj6g3v1333110.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr6

Full length sequence(26885540 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SXQ7_LOTJA 155 89.3 89.3 (tr|I3SXQ7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT4G29960.1 90.5 44.3 50.4 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:14660753-14662274 REVERSE LENGTH=291

Medicago Medtr2g037940.2 143 57.2 62.3 | transmembrane protein, putative | HC | chr2:16462457-16458440 | 20130731

Soybean Glyma15g17880.2 134 60.0 61.5

LJGI gnl|LJGI|TC62298 1076 100.0 100.0 similar to UniRef100_A7QXM8 Cluster: Chromosome undetermined scaffold_226, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_226, whole genome shotgun sequence - Vitis vinifera (Grape), partial (66%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj6g3v1333110.1 length: 181 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 2-28
103-111
113-143
168-181

Wolf-PSORT

Lj6g3v1333110.1 chlo 3, extr 3, nucl 2, cyto 2, mito 2, cyto_nucl 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj6g3v1333110.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SXQ7_LOTJA	155	89.3	89.3	(tr\|I3SXQ7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT4G29960.1	90.5	44.3	50.4	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr4:14660753-14662274 REVERSE LENGTH=291
Medicago	Medtr2g037940.2	143	57.2	62.3	\| transmembrane protein, putative \| HC \| chr2:16462457-16458440 \| 20130731
Soybean	Glyma15g17880.2	134	60.0	61.5
LJGI	gnl\|LJGI\|TC62298	1076	100.0	100.0	similar to UniRef100_A7QXM8 Cluster: Chromosome undetermined scaffold_226, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_226, whole genome shotgun sequence - Vitis vinifera (Grape), partial (66%)

no_ID
Lj6g3v1333110.1				length: 181 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	2-28 103-111 113-143 168-181