Miyakogusa Predicted Gene

Lj6g3v1331890.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MBU6_SOYBN 272 79.9 88.3 (tr|K7MBU6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G26000.1 144 41.0 60.5 | Symbols: PEP | RNA-binding KH domain-containing protein | chr4:13197280-13199539 FORWARD LENGTH=495
Medicago Medtr2g038020.1 215 75.7 83.1 | poly(rC)-binding-like protein | HC | chr2:16509240-16516412 | 20130731
Soybean Glyma15g18050.1 272 79.9 88.3  
LJGI gnl|LJGI|TC57429 1057 99.8 99.8 similar to UniRef100_A7QUD9 Cluster: Chromosome chr11 scaffold_177, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_177, whole genome shotgun sequence - Vitis vinifera (Grape), partial (71%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1331890.3 length: 178 aa.
IPR004087 K Homology domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMSmart SM00322 K 3.9e-10 53-122
IPR004088 K Homology domain, type 1
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00013 KH_1 9e-11 57-117
ProfileScan PS50084 KH_TYPE_1 12.873 54-117
no_ID  
Gene3D G3DSA:3.30.1370.10 no description 3.2e-12 54-124
HMMPanther PTHR10288 KH 5.6e-14 54-133
superfamily SSF54791 Eukaryotic 8.1e-14 41-123
Wolf-PSORT
Lj6g3v1331890.3	cyto_nucl 7.5, nucl 5.5, cyto 4.5, chlo 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1331890.3