Miyakogusa Predicted Gene

Lj6g3v1319710.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S9R2_LOTJA 448 91.0 91.0 (tr|I3S9R2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G13580.1 373 71.7 85.7 | Symbols: | Ribosomal protein L30/L7 family protein | chr3:4433809-4435109 FORWARD LENGTH=244
Medicago Medtr1g022385.1 410 81.6 87.3 | thaliana 60S ribosomal protein L7 | HC | chr1:7108698-7105236 | 20130731
Soybean Glyma15g18170.1 400 80.4 87.5  
LJGI gnl|LJGI|FS336271 1469 100.0 100.0 similar to UniRef100_Q2HVI3 Cluster: Ribosomal protein L30; n=2; Medicago truncatula|Rep: Ribosomal protein L30 - Medicago truncatula (Barrel medic), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1319710.1 length: 245 aa.
IPR005998 Ribosomal protein L7, eukaryotic
method AccNumber shortName E-value location
HMMTigr TIGR01310 L7: 9.8e-102 12-245
IPR012988 Ribosomal protein L30, N-terminal
HMMPfam PF08079 Ribosomal_L30_N 1.9e-23 14-84
IPR016082 Ribosomal protein L30, ferredoxin-like fold domain
Gene3D G3DSA:3.30.1390.20 no description 3.2e-37 205-245
HMMPfam PF00327 Ribosomal_L30 6.3e-21 86-137
superfamily SSF55129 Ribosomal 1e-60 86-245
IPR018038 Ribosomal protein L30, conserved site
PatternScan PS00634 RIBOSOMAL_L30 NA 105-137
no_ID  
Coil coil coiled-coil NA 51-76
HMMPanther PTHR11524 60S 6e-153 10-245
Seg seg seg NA 105-114
209-220
Wolf-PSORT
Lj6g3v1319710.1	cyto 9, nucl 3, chlo 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1319710.1