Miyakogusa Predicted Gene

Lj6g3v1300850.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LC40_SOYBN 152 43.8 52.9 (tr|K7LC40) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G37790.1 108 73.9 87.0 | Symbols: HAT22 | Homeobox-leucine zipper protein family | chr4:17768241-17769272 FORWARD LENGTH=278
Medicago Medtr2g038625.1 119 40.4 53.7 | homeobox associated leucine zipper protein | HC | chr2:16848996-16850491 | 20130731
Soybean Glyma15g18320.1 140 43.8 52.2  
LJGI gnl|LJGI|TC71361 73.8 92.5 92.5 homologue to UniRef100_Q39862 Cluster: Homeobox-leucine zipper protein; n=1; Glycine max|Rep: Homeobox-leucine zipper protein - Glycine max (Soybean), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1300850.1 length: 232 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 1.5e-15 85-139
HMMSmart SM00389 Homeodomain 2.9e-15 83-145
ProfileScan PS50071 HOMEOBOX_2 17.022 81-141
IPR003106 Leucine zipper, homeobox-associated
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02183 HALZ 1e-08 141-176
HMMSmart SM00340 homeobox 5.6e-16 141-184
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1.4e-16 67-139
superfamily SSF46689 Homeodomain-like 9.6e-18 67-139
IPR017970 Homeobox, conserved site
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
PatternScan PS00027 HOMEOBOX_1 NA 116-139
no_ID  
Coil coil coiled-coil NA 140-175
HMMPanther PTHR24326 FAMILY 3.3e-30 67-179
HMMPanther PTHR24326:SF63 SUBFAMILY 3.3e-30 67-179
Seg seg seg NA 45-56
67-76
155-175
Wolf-PSORT
Lj6g3v1300850.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1300850.1