Miyakogusa Predicted Gene

Lj6g3v1270810.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL C6TEP4_SOYBN 456 76.6 82.2 (tr|C6TEP4) Putative uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT4G25810.1 394 65.1 74.7 | Symbols: XTR6, XTH23 | xyloglucan endotransglycosylase 6 | chr4:13128694-13129715 FORWARD LENGTH=286
Medicago Medtr4g126920.1 435 74.6 81.4 | xyloglucan endotransglucosylase/hydrolase family protein | HC | chr4:52590097-52591687 | 20130731
Soybean Glyma13g00280.1 457 76.9 82.5  
LJGI gnl|LJGI|TC64074 1618 97.3 97.3 similar to UniRef100_A2TEI6 Cluster: Xyloglucan endotransglycosylase/hydrolase XTH-6; n=1; Populus tremula|Rep: Xyloglucan endotransglycosylase/hydrolase XTH-6 - Populus tremula (European aspen), partial (93%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1270810.1 length: 295 aa.
IPR000757 Glycoside hydrolase, family 16
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF00722 Glyco_hydro_16 2.5e-60 28-207
IPR008263 Glycoside hydrolase, family 16, active site
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
PatternScan PS01034 GLYCOSYL_HYDROL_F16 NA 101-111
IPR008264 Beta-glucanase
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
FPrintScan PR00737 GLHYDRLASE16 7.3e-06 59-77
117-130
135-152
IPR008985 Concanavalin A-like lectin/glucanases superfamily
superfamily SSF49899 Concanavalin 4.3e-84 23-295
IPR010713 Xyloglucan endo-transglycosylase, C-terminal
Cellular Component GO:0005618 cell wall    
Biological Process GO:0006073 cellular glucan metabolic process    
Molecular Function GO:0016762 xyloglucan:xyloglucosyl transferase activity    
Cellular Component GO:0048046 apoplast    
HMMPfam PF06955 XET_C 1.8e-21 246-292
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
Gene3D G3DSA:2.60.120.200 no description 1.5e-117 22-294
IPR016455 Xyloglucan endotransglucosylase/hydrolase
HMMPIR PIRSF005604 Xyloglucan 3.3e-172 1-295
no_ID  
HMMPanther PTHR31062 FAMILY 8.4e-167 6-293
Seg seg seg NA 226-251
Wolf-PSORT
Lj6g3v1270810.1	nucl 5, extr 3, golg 2, E.R._plas 2, plas 1.5, E.R. 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1270810.1