Miyakogusa Predicted Gene

Lj6g3v1239580.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MBY3_SOYBN 440 61.6 68.7 (tr|K7MBY3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G56960.1 181 36.8 49.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding family protein | chr5:23038703-23041174 REVERSE LENGTH=466
Medicago Medtr2g039620.2 417 59.3 66.1 | basic helix loop helix (BHLH) DNA-binding family protein | HC | chr2:17355333-17360530 | 20130731
Soybean Glyma15g18580.1 385 56.0 63.0  
LJGI gnl|LJGI|FS358131 1023 98.3 98.3 weakly similar to UniRef100_A7PE63 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1239580.1 length: 398 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 2.7e-12 214-274
HMMPfam PF00010 HLH 8.1e-09 215-259
HMMSmart SM00353 helix 7.8e-09 216-265
ProfileScan PS50888 BHLH 13.732 210-259
superfamily SSF47459 HLH, 2.5e-14 208-292
no_ID  
Coil coil coiled-coil NA 216-237
256-277
HMMPanther PTHR12565 STEROL 1.7e-12 207-249
HMMPanther PTHR12565:SF7 BASIC 1.7e-12 207-249
Seg seg seg NA 44-60
97-113
300-314
Wolf-PSORT
Lj6g3v1239580.1	nucl 11, cyto 1, cysk 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1239580.1