Miyakogusa Predicted Gene
- Lj6g3v1228360.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MSF5_SOYBN |
233 |
75.5 |
82.8 |
(tr|I1MSF5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G26190.1 |
204 |
77.6 |
84.0 |
| Symbols: | calmodulin-binding family protein | chr2:11147901-11150082 REVERSE LENGTH=532 |
| Medicago |
Medtr2g039910.1 |
233 |
77.9 |
81.9 |
| calmodulin-binding family protein | HC | chr2:17491443-17495191 | 20130731 |
| Soybean |
Glyma17g06150.1 |
233 |
75.5 |
82.8 |
|
| LJGI |
gnl|LJGI|TC66822 |
490 |
91.6 |
91.6 |
similar to UniRef100_A7PE53 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1228360.1 |
length: 150 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR31250 |
FAMILY |
1.6e-85 |
27-150 |
| HMMPanther |
PTHR31250:SF0 |
SUBFAMILY |
1.6e-85 |
27-150 |
- Wolf-PSORT
Lj6g3v1228360.1 chlo 5, nucl_plas 3.5, nucl 3, cyto 2, mito 2, plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1228360.1 |
|