Miyakogusa Predicted Gene

Lj6g3v1211490.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LC83_SOYBN 1368 60.9 68.3 (tr|K7LC83) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G20610.1 754 41.0 54.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink). | chr5:6969184-6972794 FORWARD LENGTH=1164
Medicago Medtr2g040970.3 1447 64.2 69.9 | EEIG1/EHBP1 protein amine-terminal domain protein | HC | chr2:17949516-17954523 | 20130731
Soybean Glyma15g18940.1 1106 55.5 61.8  
LJGI gnl|LJGI|TC62595 1227 99.5 99.5 similar to UniRef100_A7PE22 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1211490.1 length: 1196 aa.
IPR002482 Peptidoglycan-binding Lysin subgroup
method AccNumber shortName E-value location
Biological Process GO:0016998 cell wall macromolecule catabolic process    
HMMSmart SM00257 Lysin 9.6e-05 1148-1196
IPR018392 Peptidoglycan-binding lysin domain
Biological Process GO:0016998 cell wall macromolecule catabolic process    
HMMPfam PF01476 LysM 7.6e-08 1151-1195
IPR019448 EEIG1/EHBP1 N-terminal domain
HMMPfam PF10358 NT-C2 9.2e-14 103-248
no_ID  
Gene3D G3DSA:3.10.350.10 no description 0.0002 1150-1195
Seg seg seg NA 8-20
40-54
203-217
249-262
570-585
602-614
688-710
829-841
906-920
924-935
980-996
1050-1057
1071-1080
1121-1131
1136-1145
Wolf-PSORT
Lj6g3v1211490.1	nucl 11, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1211490.1