Miyakogusa Predicted Gene

Lj6g3v1201410.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MHE0_SOYBN 1118 73.9 82.0 (tr|I1MHE0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G12080.3 662 47.3 64.2 | Symbols: MSL10, ATMSL10 | mechanosensitive channel of small conductance-like 10 | chr5:3898182-3900923 REVERSE LENGTH=734
Medicago Medtr2g041220.1 1054 71.8 80.1 | mechanosensitive ion channel family protein | HC | chr2:18078914-18082447 | 20130731
Soybean Glyma09g07900.1 1089 73.5 81.4  
LJGI gnl|LJGI|BP063131 414 93.6 93.6 similar to UniRef100_A7PE01 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1201410.1 length: 766 aa.
IPR006685 Mechanosensitive ion channel MscS
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00924 MS_channel 2.8e-21 540-744
IPR010920 Like-Sm (LSM) domain
superfamily SSF50182 Sm-like 7.6e-13 584-650
IPR016688 Mechanosensitive ion channel MscS-like, plants/fungi
HMMPIR PIRSF017209 Predicted 3.1e-231 1-764
no_ID  
Gene3D G3DSA:2.30.30.60 no description 2.1e-10 600-649
HMMPanther PTHR31618 FAMILY 0 98-757
HMMPanther PTHR31618:SF0 SUBFAMILY 0 98-757
Seg seg seg NA 124-139
164-172
279-292
545-558
Wolf-PSORT
Lj6g3v1201410.1	plas 9, golg 2, nucl 1, vacu 1, E.R. 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1201410.1