Miyakogusa Predicted Gene

Lj6g3v1201400.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q6WG36_PEA 1080 81.5 90.1 (tr|Q6WG36) RPA 70kDa subunit OS=Pisum sativum PE=2 SV=1
TAIR_pep AT2G06510.1 922 68.6 82.7 | Symbols: ATRPA1A, RPA1A, RPA70A, ATRPA70A | replication protein A 1A | chr2:2585215-2587601 FORWARD LENGTH=640
Medicago Medtr2g041270.1 1055 82.3 91.2 | replication protein A 70 kDa protein | HC | chr2:18105202-18100698 | 20130731
Soybean Glyma15g19090.1 1061 83.8 91.1  
LJGI gnl|LJGI|TC57610 1548 100.0 100.0 similar to UniRef100_Q6WG36 Cluster: RPA 70kDa subunit; n=1; Pisum sativum|Rep: RPA 70kDa subunit - Pisum sativum (Garden pea), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1201400.1 length: 625 aa.
IPR004365 Nucleic acid binding, OB-fold, tRNA/helicase-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF01336 tRNA_anti 1.3e-09 193-274
IPR004591 Replication factor-a protein 1 Rpa1
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006260 DNA replication    
HMMTigr TIGR00617 rpa1: 5.7e-192 4-621
IPR007199 Replication factor-A protein 1, N-terminal
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006260 DNA replication    
HMMPfam PF04057 Rep-A_N 1.3e-27 5-102
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 1.9e-46 1-113
180-283
295-425
473-622
superfamily SSF50249 Nucleic 2.9e-30 442-625
1-111
296-430
176-293
IPR013955 Replication factor A, C-terminal
HMMPfam PF08646 Rep_fac-A_C 2.6e-51 464-615
no_ID  
HMMPanther PTHR23273 REPLICATION 3.5e-217 1-622
Wolf-PSORT
Lj6g3v1201400.1	extr 3, vacu 3, golg 3, E.R. 2, golg_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1201400.1