Miyakogusa Predicted Gene
- Lj6g3v1201180.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MHF0_SOYBN |
1349 |
83.9 |
88.9 |
(tr|I1MHF0) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT5G35560.1 |
929 |
60.5 |
73.1 |
| Symbols: | DENN (AEX-3) domain-containing protein | chr5:13742458-13747464 REVERSE LENGTH=765 |
| Medicago |
Medtr2g041470.3 |
1304 |
80.9 |
87.4 |
| DENN (AEX-3) domain protein | HC | chr2:18222922-18210251 | 20130731 |
| Soybean |
Glyma09g08000.1 |
1317 |
83.0 |
87.8 |
|
| LJGI |
gnl|LJGI|TC60386 |
817 |
98.4 |
98.4 |
similar to UniRef100_Q9FJA0 Cluster: Gb|AAD21756.1; n=1; Arabidopsis thaliana|Rep: Gb|AAD21756.1 - Arabidopsis thaliana (Mouse-ear cress), partial (12%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1201180.1 |
length: 795 aa. |
| IPR001194 |
DENN domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02141 |
DENN |
7.1e-25 |
564-678 |
| HMMSmart |
SM00799 |
Domain |
1.1e-39 |
271-679 |
| ProfileScan |
PS50211 |
DENN |
34.170 |
271-679 |
| IPR005112 |
dDENN domain |
| ProfileScan |
PS50947 |
DDENN |
9.316 |
724-795 |
| IPR005113 |
uDENN domain |
| HMMPfam |
PF03456 |
uDENN |
7.7e-05 |
162-240 |
| HMMSmart |
SM00800 |
Domain |
2.3e-05 |
109-242 |
| ProfileScan |
PS50946 |
UDENN |
19.739 |
156-242 |
| no_ID |
|
| HMMPanther |
PTHR15288 |
SUPPRESSION |
6e-146 |
34-794 |
| Seg |
seg |
seg |
NA |
442-457 |
- Wolf-PSORT
Lj6g3v1201180.1 chlo 5, nucl 3.5, cysk_nucl 2.5, plas 2, vacu 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1201180.1 |
|