Miyakogusa Predicted Gene

Lj6g3v1177290.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IGH5_MEDTR 419 66.7 79.5 (tr|G7IGH5) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_2g042550 PE=4 SV=1
TAIR_pep AT5G43790.1 314 54.9 71.3 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:17592099-17593481 REVERSE LENGTH=460
Medicago Medtr2g042550.1 419 66.7 79.5 | pentatricopeptide (PPR) repeat protein | HC | chr2:18562024-18564318 | 20130731
Soybean Glyma10g40430.1 469 79.4 85.2  
LJGI gnl|LJGI|FS320665 888 100.0 100.0 weakly similar to UniRef100_A7NWV1 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1177290.1 length: 297 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.16 262-286
HMMPfam PF13041 PPR_2 1.6e-09 69-119
no_ID  
HMMPanther PTHR24015 FAMILY 8.5e-76 12-296
HMMPanther PTHR24015:SF109SUBFAMILY NOT 8.5e-76 12-296
Seg seg seg NA 184-197
Wolf-PSORT
Lj6g3v1177290.1	chlo 7, nucl 4, mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1177290.1