Miyakogusa Predicted Gene
- Lj6g3v1177260.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1L1R5_SOYBN |
333 |
85.9 |
93.5 |
(tr|I1L1R5) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G19110.1 |
220 |
57.6 |
72.3 |
| Symbols: | inter-alpha-trypsin inhibitor heavy chain-related | chr1:6602270-6605766 FORWARD LENGTH=754 |
| Medicago |
Medtr2g042570.1 |
312 |
82.1 |
90.8 |
| inter-alpha-trypsin inhibitor heavy chain-like protein | HC | chr2:18566744-18571686 | 20130731 |
| Soybean |
Glyma09g08210.1 |
322 |
79.3 |
86.4 |
|
| LJGI |
gnl|LJGI|TC79987 |
357 |
85.7 |
85.7 |
weakly similar to UniRef100_Q9LMB7 Cluster: F14D16.26; n=1; Arabidopsis thaliana|Rep: F14D16.26 - Arabidopsis thaliana (Mouse-ear cress), partial (19%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1177260.1 |
length: 184 aa. |
| IPR002035 |
von Willebrand factor, type A |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Gene3D |
G3DSA:3.40.50.410 |
no description |
2.2e-07 |
4-154 |
| HMMSmart |
SM00327 |
von |
0.005 |
1-168 |
| ProfileScan |
PS50234 |
VWFA |
10.904 |
1-183 |
| no_ID |
|
| HMMPanther |
PTHR10338 |
VON |
3.5e-69 |
1-179 |
| HMMPanther |
PTHR10338:SF8 |
INTER-ALPHA-TRYPSIN |
3.5e-69 |
1-179 |
| HMMPfam |
PF13519 |
VWA_2 |
4.4e-16 |
5-150 |
| superfamily |
SSF53300 |
vWA-like |
5.6e-21 |
1-167 |
- Wolf-PSORT
Lj6g3v1177260.1 nucl 6, nucl_plas 6, plas 4, cyto 2, chlo 1, mito 1, chlo_mito 1, cyto_pero 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1177260.1 |
Not targeted |
-60.480 |
-7.283 |
-4.763 |
89.18% |
-48.435
|