| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I3T6P8_LOTJA | 988 | 99.4 | 99.8 | (tr|I3T6P8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep | AT3G42950.1 | 743 | 74.0 | 85.0 | | Symbols: | Pectin lyase-like superfamily protein | chr3:15015383-15017800 FORWARD LENGTH=484 |
| Medicago | Medtr2g042740.1 | 833 | 85.2 | 90.3 | | pectin lyase superfamily protein | HC | chr2:18636698-18641564 | 20130731 |
| Soybean | Glyma09g08270.1 | 833 | 84.5 | 91.3 | |
| LJGI | gnl|LJGI|TC70466 | 1178 | 100.0 | 100.0 | similar to UniRef100_A7PDT4 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%) |
| Lj6g3v1176170.2 | length: 482 aa. | |||
| IPR000743 | Glycoside hydrolase, family 28 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0004650 | polygalacturonase activity | ||
| Biological Process | GO:0005975 | carbohydrate metabolic process | ||
| HMMPfam | PF00295 | Glyco_hydro_28 | 3.4e-46 | 160-434 |
| IPR006626 | Parallel beta-helix repeat | |||
| HMMSmart | SM00710 | Parallel | 9.2e+02 | 231-258 259-280 293-315 321-342 350-371 384-406 411-432 |
| IPR011050 | Pectin lyase fold/virulence factor | |||
| superfamily | SSF51126 | Pectin | 3.7e-110 | 44-454 |
| IPR012334 | Pectin lyase fold | |||
| Gene3D | G3DSA:2.160.20.10 | no description | 1.3e-120 | 59-443 |
| no_ID | ||||
| HMMPanther | PTHR31339 | FAMILY | 1.3e-188 | 17-480 |
| HMMPanther | PTHR31339:SF0 | SUBFAMILY | 1.3e-188 | 17-480 |
Lj6g3v1176170.2 chlo 8, cyto_nucl 2, nucl 1.5, cyto 1.5, mito 1, plas 1, pero 1, mito_plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj6g3v1176170.2 |