Miyakogusa Predicted Gene

Lj6g3v1174050.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L1T2_SOYBN 552 86.5 89.1 (tr|I1L1T2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G19220.1 505 78.6 85.5 | Symbols: ARF19, IAA22, ARF11 | auxin response factor 19 | chr1:6628395-6632779 REVERSE LENGTH=1086
Medicago Medtr4g124900.2 537 83.2 87.8 | auxin response factor 2 | HC | chr4:51795315-51802487 | 20130731
Soybean Glyma15g19980.1 545 85.5 88.2  
LJGI gnl|LJGI|AV409033 565 92.3 92.3 homologue to UniRef100_Q6L8U3 Cluster: Auxin response factor 1; n=1; Cucumis sativus|Rep: Auxin response factor 1 - Cucumis sativus (Cucumber), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1174050.1 length: 304 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 2.9e-21 126-227
HMMSmart SM01019 B3 9e-23 126-228
ProfileScan PS50863 B3 12.026 126-228
IPR010525 Auxin response factor
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Biological Process GO:0009725 response to hormone stimulus    
HMMPfam PF06507 Auxin_resp 2.6e-21 252-304
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 9.1e-41 118-241
superfamily SSF101936 DNA-binding 4.7e-49 109-256
no_ID  
HMMPanther PTHR31384 FAMILY 4.6e-174 1-304
Seg seg seg NA 30-43
235-243
250-256
Wolf-PSORT
Lj6g3v1174050.1	nucl 10, chlo 1, cyto 1, mito 1, plas 1, chlo_mito 1, mito_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1174050.1