Miyakogusa Predicted Gene
- Lj6g3v1162900.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LY99_SOYBN |
234 |
73.7 |
83.6 |
(tr|I1LY99) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G20810.1 |
230 |
69.0 |
79.7 |
| Symbols: | SAUR-like auxin-responsive protein family | chr5:7044791-7045555 FORWARD LENGTH=165 |
| Medicago |
Medtr2g043960.1 |
241 |
75.3 |
87.3 |
| SAUR-like auxin-responsive family protein | HC | chr2:19105610-19108113 | 20130731 |
| Soybean |
Glyma13g17380.1 |
234 |
73.7 |
83.6 |
|
| LJGI |
gnl|LJGI|TC69164 |
795 |
100.0 |
100.0 |
similar to UniRef100_Q8H6T6 Cluster: Auxin-regulated protein; n=1; Phaseolus vulgaris|Rep: Auxin-regulated protein - Phaseolus vulgaris (Kidney bean) (French bean), partial (69%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1162900.1 |
length: 167 aa. |
| IPR003676 |
Auxin responsive SAUR protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02519 |
Auxin_inducible |
3.5e-27 |
70-143 |
| no_ID |
|
| HMMPanther |
PTHR31374 |
FAMILY |
1e-18 |
76-143 |
| HMMPanther |
PTHR31374:SF0 |
SUBFAMILY |
1e-18 |
76-143 |
- Wolf-PSORT
Lj6g3v1162900.1 nucl 7.5, cyto_nucl 5, mito 2, cyto 1.5, pero 1, cysk 1, chlo_mito 1, cyto_mito 1, golg_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1162900.1 |
|