Miyakogusa Predicted Gene

Lj6g3v1150710.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MC82_SOYBN 340 56.2 67.2 (tr|K7MC82) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G53690.1 279 54.1 71.9 | Symbols: | RING/U-box superfamily protein | chr3:19898997-19900044 REVERSE LENGTH=320
Medicago Medtr2g044440.1 347 63.9 76.8 | zinc finger, C3HC4 type (RING finger) protein | HC | chr2:19326432-19327307 | 20130731
Soybean Glyma09g08670.1 338 67.9 77.9  
LJGI gnl|LJGI|FS329711 999 96.3 96.3 weakly similar to UniRef100_A7PDQ1 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1150710.1 length: 331 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 7.1 127-174
287-329
ProfileScan PS50089 ZF_RING_2 9.952 127-173
IPR002867 Zinc finger, C6HC-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF01485 IBR 4.9e-06 211-257
277-323
HMMSmart SM00647 In 0.039 195-257
267-329
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.1e-05 118-189
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 145-154
no_ID  
HMMPanther PTHR11685 ARIADNE 8.3e-116 59-331
HMMPanther PTHR11685:SF63 OS11G0103400 8.3e-116 59-331
HMMPfam PF13923 zf-C3HC4_2 1.3e-06 125-176
Seg seg seg NA 6-53
81-92
superfamily SSF57850 RING/U-box 3.9e-08 120-218
267-331
194-262
Wolf-PSORT
Lj6g3v1150710.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1150710.1