Miyakogusa Predicted Gene
- Lj6g3v1138510.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1L1X0_SOYBN |
804 |
74.6 |
84.8 |
(tr|I1L1X0) Pectinesterase OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT3G43270.1 |
669 |
62.0 |
75.7 |
| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr3:15222402-15225124 REVERSE LENGTH=527 |
| Medicago |
Medtr2g044880.1 |
774 |
71.6 |
82.1 |
| pectinesterase/pectinesterase inhibitor | HC | chr2:19514677-19509054 | 20130731 |
| Soybean |
Glyma09g09050.1 |
804 |
74.6 |
84.8 |
|
| LJGI |
gnl|LJGI|TC60009 |
301 |
82.9 |
82.9 |
similar to UniRef100_Q43062 Cluster: Pectinesterase PPE8B precursor; n=1; Prunus persica|Rep: Pectinesterase PPE8B precursor - Prunus persica (Peach), partial (73%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1138510.1 |
length: 522 aa. |
| IPR000070 |
Pectinesterase, catalytic |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005618 |
cell wall |
|
|
| Molecular Function |
GO:0030599 |
pectinesterase activity |
|
|
| Biological Process |
GO:0042545 |
cell wall modification |
|
|
| HMMPfam |
PF01095 |
Pectinesterase |
1.3e-145 |
207-506 |
| IPR006501 |
Pectinesterase inhibitor |
| Molecular Function |
GO:0004857 |
enzyme inhibitor activity |
|
|
| Molecular Function |
GO:0030599 |
pectinesterase activity |
|
|
| Gene3D |
G3DSA:1.20.140.40 |
no description |
8.4e-13 |
75-153 |
| HMMPfam |
PF04043 |
PMEI |
6.5e-16 |
56-147 |
| HMMSmart |
SM00856 |
Plant |
4.4e-09 |
32-158 |
| superfamily |
SSF101148 |
Plant |
2.5e-10 |
78-176 |
| IPR011050 |
Pectin lyase fold/virulence factor |
| superfamily |
SSF51126 |
Pectin |
2.1e-111 |
200-520 |
| IPR012334 |
Pectin lyase fold |
| Gene3D |
G3DSA:2.160.20.10 |
no description |
6.1e-120 |
206-518 |
| IPR018040 |
Pectinesterase, active site |
| PatternScan |
PS00503 |
PECTINESTERASE_2 |
NA |
351-360 |
| no_ID |
|
| HMMPanther |
PTHR31707 |
FAMILY |
5.6e-236 |
52-522 |
| HMMPanther |
PTHR31707:SF0 |
SUBFAMILY |
5.6e-236 |
52-522 |
| Seg |
seg |
seg |
NA |
86-104 |
- Wolf-PSORT
Lj6g3v1138510.1 nucl 6, chlo 4, vacu 2, E.R. 2, chlo_mito 2, E.R._vacu 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1138510.1 |
|