Miyakogusa Predicted Gene

Lj6g3v1126350.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SMK2_LOTJA 477 88.1 93.7 (tr|I3SMK2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G17440.1 423 79.5 90.1 | Symbols: NPSN13, ATNPSN13 | novel plant snare 13 | chr3:5969909-5972290 REVERSE LENGTH=269
Medicago Medtr4g123910.1 453 85.0 91.8 | novel plant SNARE-like protein | HC | chr4:51088786-51082714 | 20130731
Soybean Glyma17g04460.1 457 85.0 92.9  
LJGI gnl|LJGI|TC61298 886 88.9 88.9 similar to UniRef100_A7NVY7 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1126350.2 length: 270 aa.
IPR000727 Target SNARE coiled-coil domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00397 Helical 7.8e-05 141-208
ProfileScan PS50192 T_SNARE 10.343 146-208
IPR005606 Sec20
HMMPfam PF03908 Sec20 8e-07 154-229
no_ID  
Coil coil coiled-coil NA 36-74
Gene3D G3DSA:1.20.5.110 no description 1.4e-13 137-209
HMMPanther PTHR21230 VESICLE 3.1e-113 10-243
HMMPanther PTHR21230:SF2 NOVEL 3.1e-113 10-243
Wolf-PSORT
Lj6g3v1126350.2	nucl 6, cyto 3, golg 3, cysk_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1126350.2