Miyakogusa Predicted Gene

Lj6g3v1094860.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LCM4_SOYBN 1349 77.6 85.4 (tr|K7LCM4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G21300.1 860 51.3 69.4 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:11336479-11339052 FORWARD LENGTH=857
Medicago Medtr8g105210.1 1328 78.6 87.7 | PPR containing plant-like protein | HC | chr8:44370221-44373841 | 20130731
Soybean Glyma09g11510.1 1230 75.6 82.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1094860.1 length: 844 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.034 177-199
278-300
379-399
409-430
581-604
682-705
HMMPfam PF13041 PPR_2 6.8e-11 203-247
304-346
506-553
606-653
HMMTigr TIGR00756 PPR: 4.3e-09 205-238
306-340
508-539
609-642
ProfileScan PS51375 PPR 7.015 102-136
203-237
172-202
137-171
304-338
273-303
238-272
339-373
405-439
374-404
506-540
475-505
607-641
576-606
642-672
678-708
744-778
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.4e-07 707-743
no_ID  
HMMPanther PTHR24015 FAMILY 1.9e-243 56-832
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 1.9e-243 56-832
Seg seg seg NA 544-558
Wolf-PSORT
Lj6g3v1094860.1	chlo 10, mito 2, cyto 1, E.R. 1, cyto_mito 1, mito_plas 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1094860.1