Miyakogusa Predicted Gene

Lj6g3v1093580.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr6

Full length sequence(26885540 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1L235_SOYBN 263 52.1 65.2 (tr|I1L235) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT1G29530.1 60.8 46.2 67.3 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34310.3); Has 84 Blast hits to 78 proteins in 24 species: Archae - 2; Bacteria - 4; Metazoa - 9; Fungi - 8; Plants - 55; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr1:10325553-10326651 REVERSE LENGTH=236

Medicago Medtr6g068870.1 132 42.2 58.3 | hypothetical protein | HC | chr6:24756215-24753312 | 20130731

Soybean Glyma09g10520.1 263 52.1 65.2

LJGI gnl|LJGI|TC62003 2030 99.8 99.8 similar to UniRef100_Q5TCX8-3 Cluster: Isoform 3 of Q5TCX8 ; n=1; Homo sapiens|Rep: Isoform 3 of Q5TCX8 - Homo sapiens (Human), partial (4%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj6g3v1093580.1 length: 343 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 5-17
40-51

Wolf-PSORT

Lj6g3v1093580.1 nucl 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj6g3v1093580.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1L235_SOYBN	263	52.1	65.2	(tr\|I1L235) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT1G29530.1	60.8	46.2	67.3	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34310.3); Has 84 Blast hits to 78 proteins in 24 species: Archae - 2; Bacteria - 4; Metazoa - 9; Fungi - 8; Plants - 55; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). \| chr1:10325553-10326651 REVERSE LENGTH=236
Medicago	Medtr6g068870.1	132	42.2	58.3	\| hypothetical protein \| HC \| chr6:24756215-24753312 \| 20130731
Soybean	Glyma09g10520.1	263	52.1	65.2
LJGI	gnl\|LJGI\|TC62003	2030	99.8	99.8	similar to UniRef100_Q5TCX8-3 Cluster: Isoform 3 of Q5TCX8 ; n=1; Homo sapiens\|Rep: Isoform 3 of Q5TCX8 - Homo sapiens (Human), partial (4%)

no_ID
Lj6g3v1093580.1				length: 343 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	5-17 40-51