| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7IIV0_MEDTR | 592 | 74.0 | 83.5 | (tr|G7IIV0) Polygalacturonase OS=Medicago truncatula GN=MTR_2g049400 PE=3 SV=1 |
| TAIR_pep | AT2G43880.1 | 475 | 62.2 | 78.6 | | Symbols: | Pectin lyase-like superfamily protein | chr2:18173034-18174482 FORWARD LENGTH=394 |
| Medicago | Medtr2g049400.1 | 592 | 74.0 | 83.5 | | pectin lyase superfamily protein | LC | chr2:21772816-21776116 | 20130731 |
| Soybean | Glyma15g23310.1 | 508 | 65.2 | 76.2 | |
| LJGI | --No_Hits-- |
| Lj6g3v1093540.1 | length: 411 aa. | |||
| IPR000743 | Glycoside hydrolase, family 28 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0004650 | polygalacturonase activity | ||
| Biological Process | GO:0005975 | carbohydrate metabolic process | ||
| HMMPfam | PF00295 | Glyco_hydro_28 | 1.3e-98 | 79-401 |
| PatternScan | PS00502 | POLYGALACTURONASE | NA | 258-271 |
| IPR006626 | Parallel beta-helix repeat | |||
| HMMSmart | SM00710 | Parallel | 2.7 | 201-227 228-249 281-302 |
| IPR011050 | Pectin lyase fold/virulence factor | |||
| superfamily | SSF51126 | Pectin | 1.9e-119 | 32-411 |
| IPR012334 | Pectin lyase fold | |||
| Gene3D | G3DSA:2.160.20.10 | no description | 5e-117 | 45-409 |
| no_ID | ||||
| HMMPanther | PTHR31375 | FAMILY | 2.7e-176 | 7-411 |
| HMMPanther | PTHR31375:SF0 | SUBFAMILY | 2.7e-176 | 7-411 |
Lj6g3v1093540.1 nucl 8, cyto 3, chlo 1, mito 1, extr 1, chlo_mito 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj6g3v1093540.1 |