Miyakogusa Predicted Gene
- Lj6g3v1093320.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SJ46_LOTJA |
879 |
96.8 |
96.8 |
(tr|I3SJ46) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G34940.2 |
597 |
64.4 |
80.9 |
| Symbols: AtGUS3, GUS3 | glucuronidase 3 | chr5:13235912-13238718 REVERSE LENGTH=536 |
| Medicago |
Medtr2g451510.1 |
706 |
78.7 |
85.8 |
| glycoside hydrolase family 79 amine-terminal domain protein | HC | chr2:22880254-22875548 | 20130731 |
| Soybean |
Glyma15g23550.1 |
721 |
82.5 |
89.2 |
|
| LJGI |
gnl|LJGI|GO034433 |
920 |
99.6 |
99.6 |
similar to UniRef100_A7QTL4 Cluster: Chromosome chr11 scaffold_170, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_170, whole genome shotgun sequence - Vitis vinifera (Grape), partial (25%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1093320.1 |
length: 441 aa. |
| IPR005199 |
Glycoside hydrolase, family 79 |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016020 |
membrane |
|
|
| Molecular Function |
GO:0016798 |
hydrolase activity, acting on glycosyl bonds |
|
|
| HMMPanther |
PTHR14363 |
HEPARANASE-RELATED |
3.6e-227 |
28-439 |
| HMMPfam |
PF03662 |
Glyco_hydro_79n |
2e-153 |
25-341 |
| IPR013781 |
Glycoside hydrolase, catalytic domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Gene3D |
G3DSA:3.20.20.80 |
no description |
4.4e-08 |
135-333 |
| IPR017853 |
Glycoside hydrolase, superfamily |
| superfamily |
SSF51445 |
(Trans)glycosidases |
3.9e-65 |
40-387 |
| no_ID |
|
| HMMPanther |
PTHR14363:SF7 |
HEPARANASE-RELATED |
3.6e-227 |
28-439 |
| Seg |
seg |
seg |
NA |
7-19 |
- Wolf-PSORT
Lj6g3v1093320.1 chlo 6, extr 2, vacu 2, nucl 1, cyto 1, plas 1, E.R. 1, cyto_nucl 1, nucl_plas 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1093320.1 |
|