Miyakogusa Predicted Gene

Lj6g3v1093250.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T8K0_LOTJA 1040 93.4 93.4 (tr|I3T8K0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G12550.1 599 54.5 71.3 | Symbols: | ubiquitin-associated (UBA)/TS-N domain-containing protein | chr2:5114881-5118486 FORWARD LENGTH=562
Medicago Medtr2g450730.1 794 75.2 83.4 | NEDD8 ultimate buster-like protein | HC | chr2:22550887-22542439 | 20130731
Soybean Glyma09g12030.1 811 75.4 83.3  
LJGI gnl|LJGI|TC60461 1334 99.9 99.9 similar to UniRef100_A7QS43 Cluster: Chromosome undetermined scaffold_155, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_155, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1093250.1 length: 557 aa.
IPR000449 Ubiquitin-associated/translation elongation factor EF1B, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00627 UBA 0.00017 283-317
355-389
IPR009060 UBA-like
Molecular Function GO:0005515 protein binding    
superfamily SSF46934 UBA-like 0.00077 254-320
341-391
401-471
IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
HMMSmart SM00165 Ubiquitin 0.22 282-319
354-391
414-450
ProfileScan PS50030 UBA 8.571 280-320
352-392
410-437
IPR019955 Ubiquitin supergroup
ProfileScan PS50053 UBIQUITIN_2 9.918 23-72
no_ID  
Coil coil coiled-coil NA 395-416
Gene3D G3DSA:1.10.8.10 no description 0.00035 276-320
348-391
412-440
Gene3D G3DSA:3.10.20.90 no description 6.7e-05 23-72
HMMPanther PTHR12948 NEDD8 5.7e-215 1-549
HMMPanther PTHR12948:SF4 UBIQUITIN-ASSOCIATED 5.7e-215 1-549
Seg seg seg NA 328-340
465-480
546-550
Wolf-PSORT
Lj6g3v1093250.1	cyto 8, chlo 2, mito 1, pero 1, cysk 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1093250.1