| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1M7C8_SOYBN | 325 | 65.5 | 72.2 | (tr|I1M7C8) Uncharacterized protein OS=Glycine max PE=3 SV=2 |
| TAIR_pep | AT5G44840.1 | 207 | 48.4 | 63.5 | | Symbols: | Pectin lyase-like superfamily protein | chr5:18104851-18107127 REVERSE LENGTH=381 |
| Medicago | Medtr0157s0060.1 | 310 | 64.0 | 72.4 | | polygalacturonase/glycoside hydrolase family protein | LC | scaffold0157:20596-15247 | 20130731 |
| Soybean | Glyma14g04850.1 | 326 | 65.5 | 72.2 | |
| LJGI | gnl|LJGI|TC73249 | 54.0 | 92.3 | 92.3 | weakly similar to UniRef100_UPI0000162B6A Cluster: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein; n=1; Arabidopsis thaliana|Rep: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein - Arabidopsis thaliana, partial (40%) |
| Lj6g3v1091180.1 | length: 261 aa. | |||
| IPR000743 | Glycoside hydrolase, family 28 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0004650 | polygalacturonase activity | ||
| Biological Process | GO:0005975 | carbohydrate metabolic process | ||
| HMMPfam | PF00295 | Glyco_hydro_28 | 1.2e-74 | 11-248 |
| PatternScan | PS00502 | POLYGALACTURONASE | NA | 98-111 |
| IPR006626 | Parallel beta-helix repeat | |||
| HMMSmart | SM00710 | Parallel | 27 | 41-67 68-89 91-111 121-142 |
| IPR011050 | Pectin lyase fold/virulence factor | |||
| superfamily | SSF51126 | Pectin | 1.2e-78 | 12-259 |
| IPR012334 | Pectin lyase fold | |||
| Gene3D | G3DSA:2.160.20.10 | no description | 5.8e-81 | 11-259 |
| no_ID | ||||
| HMMPanther | PTHR31736 | FAMILY | 3.7e-110 | 12-259 |
| HMMPanther | PTHR31736:SF0 | SUBFAMILY | 3.7e-110 | 12-259 |
| Seg | seg | seg | NA | 87-98 232-245 |
Lj6g3v1091180.1 nucl 9, cyto 3, chlo 1, extr 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj6g3v1091180.1 |