Miyakogusa Predicted Gene

Lj6g3v1078590.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MI15_SOYBN 1099 77.4 84.2 (tr|I1MI15) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G25180.1 392 40.1 53.9 | Symbols: ARR12, RR12 | response regulator 12 | chr2:10724490-10726961 REVERSE LENGTH=596
Medicago Medtr2g450070.1 841 62.4 74.4 | two-component response regulator ARR12-like protein | HC | chr2:22084494-22088472 | 20130731
Soybean Glyma15g24770.1 1099 77.4 84.2  
LJGI gnl|LJGI|TC80401 819 99.8 99.8 similar to UniRef100_A7R0P8 Cluster: Chromosome undetermined scaffold_314, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_314, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1078590.2 length: 696 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 2.6e-11 213-263
IPR001789 Signal transduction response regulator, receiver domain
Molecular Function GO:0000156 phosphorelay response regulator activity    
Biological Process GO:0000160 phosphorelay signal transduction system    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF00072 Response_reg 1.9e-24 26-134
HMMSmart SM00448 cheY-homologous 6.5e-35 24-136
ProfileScan PS50110 RESPONSE_REGULATORY 34.029 25-140
IPR006447 Myb domain, plants
HMMTigr TIGR01557 myb_SHAQKYF: 1.9e-24 211-264
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 2.8e-29 208-268
superfamily SSF46689 Homeodomain-like 1.9e-20 207-270
IPR011006 CheY-like superfamily
superfamily SSF52172 CheY-like 4.6e-37 21-144
IPR017053 Response regulator, plant B-type
HMMPIR PIRSF036392 Response 1.5e-184 1-695
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 11.409 208-267
no_ID  
Gene3D G3DSA:3.40.50.2300 no description 4.8e-42 23-157
HMMPanther PTHR26402 RESPONSE 1.1e-65 24-347
HMMPanther PTHR26402:SF256TWO-COMPONENT RESPONSE 1.1e-65 24-347
Seg seg seg NA 190-205
Wolf-PSORT
Lj6g3v1078590.2	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1078590.2