| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | B9FM15_ORYSJ | 57.8 | 33.0 | 50.5 | (tr|B9FM15) Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_16815 PE=4 SV=1 |
| TAIR_pep | AT5G19030.1 | 50.8 | 31.6 | 52.6 | | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:6357503-6359081 REVERSE LENGTH=172 |
| Medicago | --No_Hits-- | ||||
| Soybean | Glyma02g04980.4 | 49.7 | 32.5 | 51.8 | |
| LJGI | gnl|LJGI|FS335970 | 977 | 98.1 | 98.1 | UniRef100_A9C3A1 Cluster: ABC transporter related; n=1; Delftia acidovorans SPH-1|Rep: ABC transporter related -, partial (2%) |
| Lj6g3v1078200.1 | length: 329 aa. | |||
| IPR000504 | RNA recognition motif domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| HMMPfam | PF00076 | RRM_1 | 1.9e-12 | 129-198 |
| HMMSmart | SM00360 | RNA | 4.9e-12 | 128-201 |
| ProfileScan | PS50102 | RRM | 14.641 | 127-205 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 2.3e-17 | 110-209 |
| no_ID | ||||
| HMMPanther | PTHR24622 | FAMILY | 3.1e-12 | 41-206 |
| Seg | seg | seg | NA | 157-169 |
| superfamily | SSF54928 | RNA-binding | 1.8e-19 | 80-207 |
Lj6g3v1078200.1 nucl 7.5, cyto_nucl 7, cyto 5.5
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj6g3v1078200.1 |