Miyakogusa Predicted Gene

Lj6g3v1078170.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SW57_LOTJA 437 95.2 95.2 (tr|I3SW57) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G57950.1 256 57.4 71.3 | Symbols: | 26S proteasome regulatory subunit, putative | chr5:23460765-23462128 FORWARD LENGTH=227
Medicago Medtr2g460780.1 339 72.9 84.7 | 26S proteasome non-ATPase regulatory subunit-like protein | HC | chr2:25071071-25075631 | 20130731
Soybean Glyma06g27880.1 370 79.6 87.4  
LJGI gnl|LJGI|TC81181 1368 100.0 100.0 similar to UniRef100_A7PFS2 Cluster: Chromosome chr11 scaffold_14, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_14, whole genome shotgun sequence - Vitis vinifera (Grape), partial (75%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1078170.1 length: 228 aa.
IPR001478 PDZ domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
superfamily SSF50156 PDZ 2.9e-08 143-217
no_ID  
Coil coil coiled-coil NA 59-87
Gene3D G3DSA:2.30.42.10 no description 1.6e-10 144-224
HMMPanther PTHR12651 26S 8.2e-71 1-228
HMMPanther PTHR12651:SF0 SUBFAMILY 8.2e-71 1-228
Seg seg seg NA 60-70
Wolf-PSORT
Lj6g3v1078170.1	cyto 7, chlo 2, nucl 2, cysk 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1078170.1