Miyakogusa Predicted Gene

Lj6g3v1077850.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1LT39_SOYBN 1275 88.8 91.7 (tr|I1LT39) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G57940.3 1091 78.0 85.1 | Symbols: ATCNGC5, CNGC5 | cyclic nucleotide gated channel 5 | chr5:23457116-23460439 FORWARD LENGTH=710
Medicago Medtr4g130820.1 1181 83.9 89.6 | cyclic nucleotide-gated ion channel-like protein | HC | chr4:54512958-54519466 | 20130731
Soybean Glyma12g23890.1 1274 88.8 91.7  
LJGI gnl|LJGI|FS327803 837 98.4 98.4 similar to UniRef100_A7PFR5 Cluster: Chromosome chr11 scaffold_14, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_14, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1077850.1 length: 722 aa.
IPR000048 IQ motif, EF-hand binding site
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS50096 IQ 6.595 632-661
IPR000595 Cyclic nucleotide-binding domain
HMMPfam PF00027 cNMP_binding 6.5e-09 517-612
HMMSmart SM00100 Cyclic 9.3e-13 496-627
ProfileScan PS50042 CNMP_BINDING_3 13.435 496-626
IPR005821 Ion transport domain
Molecular Function GO:0005216 ion channel activity    
Biological Process GO:0006811 ion transport    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00520 Ion_trans 1.2e-23 144-413
IPR014710 RmlC-like jelly roll fold
Gene3D G3DSA:2.60.120.10 no description 7.6e-28 494-612
IPR018490 Cyclic nucleotide-binding-like
superfamily SSF51206 cAMP-binding 5e-37 421-629
no_ID  
Gene3D G3DSA:1.10.287.630 no description 8.7e-10 430-487
Gene3D G3DSA:1.10.287.70 no description 2e-24 357-418
HMMPanther PTHR10217 VOLTAGE 0 80-670
HMMPanther PTHR10217:SF7 CYCLIC 0 80-670
Seg seg seg NA 14-24
392-411
658-664
superfamily SSF81324 Voltage-gated 1.9e-37 91-433
Wolf-PSORT
Lj6g3v1077850.1	plas 10, vacu 2, nucl 1, golg 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1077850.1