Miyakogusa Predicted Gene

Lj6g3v1077810.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SSI8_LOTJA 763 85.7 86.0 (tr|I3SSI8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G57930.1 489 64.5 76.1 | Symbols: APO2, emb1629 | Arabidopsis thaliana protein of unknown function (DUF794) | chr5:23454690-23456354 FORWARD LENGTH=440
Medicago Medtr2g088390.1 581 75.4 84.1 | APO RNA-binding protein | HC | chr2:37254350-37249092 | 20130731
Soybean Glyma09g10560.1 604 70.3 76.6  
LJGI gnl|LJGI|TC68125 1322 100.0 100.0 similar to UniRef100_A7PFR1 Cluster: Chromosome chr11 scaffold_14, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_14, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1077810.1 length: 442 aa.
IPR023342 APO domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMPfam PF05634 APO_RNA-bind 1.3e-29 66-268
303-419
ProfileScan PS51499 APO 29.915 164-249
334-419
no_ID  
Coil coil coiled-coil NA 306-327
HMMPanther PTHR10388 EUKARYOTIC 6.2e-126 37-399
HMMPanther PTHR10388:SF3 UNCHARACTERIZED 6.2e-126 37-399
Seg seg seg NA 28-50
98-111
153-162
253-265
Wolf-PSORT
Lj6g3v1077810.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1077810.1