Miyakogusa Predicted Gene

Lj6g3v1077660.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KDE5_SOYBN 921 80.7 84.1 (tr|I1KDE5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G30600.1 818 71.3 78.1 | Symbols: | signal recognition particle receptor alpha subunit family protein | chr4:14938142-14940600 REVERSE LENGTH=634
Medicago Medtr4g130770.1 830 74.6 80.4 | signal recognition particle receptor protein, putative | HC | chr4:54489810-54494349 | 20130731
Soybean Glyma06g28570.1 921 80.7 84.1  
LJGI gnl|LJGI|TC69842 1332 100.0 100.0 homologue to UniRef100_A7PFQ9 Cluster: Chromosome chr11 scaffold_14, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr11 scaffold_14, whole genome shotgun sequence - Vitis vinifera (Grape), partial (43%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1077660.1 length: 586 aa.
IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006614 SRP-dependent cotranslational protein targeting to membrane    
HMMPfam PF00448 SRP54 6.5e-43 420-579
HMMSmart SM00962 SRP54-type 2e-46 419-586
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 5.1e-08 418-558
IPR007222 Signal recognition particle receptor, alpha subunit, N-terminal
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005047 signal recognition particle binding    
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005785 signal recognition particle receptor complex    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0006886 intracellular protein transport    
HMMPfam PF04086 SRP-alpha_N 2.7e-52 28-302
IPR011012 Longin-like domain
Biological Process GO:0006810 transport    
superfamily SSF64356 SNARE-like 1.1e-37 1-125
IPR013822 Signal recognition particle, SRP54 subunit, helical bundle
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006614 SRP-dependent cotranslational protein targeting to membrane    
HMMPfam PF02881 SRP54_N 7e-07 320-392
HMMSmart SM00963 SRP54-type 0.0028 316-398
superfamily SSF47364 Domain 9.5e-13 313-400
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.4e-35 411-582
no_ID  
Gene3D G3DSA:1.20.120.140 no description 3.9e-12 320-400
Gene3D G3DSA:3.40.50.300 no description 7.9e-55 415-586
HMMPanther PTHR11564 GTPASE 4.7e-229 2-586
HMMPanther PTHR11564:SF8 SIGNAL 4.7e-229 2-586
Seg seg seg NA 133-156
288-306
421-431
Wolf-PSORT
Lj6g3v1077660.1	chlo 10, cyto 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1077660.1