Miyakogusa Predicted Gene

Lj6g3v1077310.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KDI8_SOYBN 1064 72.4 78.1 (tr|I1KDI8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G57870.2 864 58.9 71.6 | Symbols: eIFiso4G1 | MIF4G domain-containing protein / MA3 domain-containing protein | chr5:23439755-23443433 FORWARD LENGTH=776
Medicago Medtr4g130570.1 1003 65.7 74.8 | eukaryotic translation initiation factor iso4G | HC | chr4:54404124-54410540 | 20130731
Soybean Glyma06g30880.1 1064 72.4 78.1  
LJGI gnl|LJGI|TC62483 1229 100.0 100.0 similar to UniRef100_A7PFP5 Cluster: Chromosome chr11 scaffold_14, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_14, whole genome shotgun sequence - Vitis vinifera (Grape), partial (25%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1077310.1 length: 771 aa.
IPR003890 MIF4G-like, type 3
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0005515 protein binding    
HMMPfam PF02854 MIF4G 8.8e-56 194-420
HMMSmart SM00543 Middle 5.4e-56 194-420
IPR003891 Initiation factor eIF-4 gamma, MA3
HMMPfam PF02847 MA3 4.4e-21 609-719
HMMSmart SM00544 Domain 2.2e-25 607-719
ProfileScan PS51366 MI 21.793 606-728
IPR016021 MIF4-like, type 1/2/3
Biological Process GO:0016070 RNA metabolic process    
Gene3D G3DSA:1.25.40.180 no description 2.7e-32 195-437
601-757
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 1.8e-36 183-423
599-740
no_ID  
HMMPanther PTHR23253 EUKARYOTIC 0 40-759
HMMPanther PTHR23253:SF2 EUKARYOTIC 0 40-759
Seg seg seg NA 23-33
459-469
476-490
545-554
576-601
Wolf-PSORT
Lj6g3v1077310.1	chlo 6, nucl 5, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1077310.1