Miyakogusa Predicted Gene
- Lj6g3v1055600.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NE40_SOYBN |
607 |
93.4 |
95.9 |
(tr|I1NE40) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT3G11910.2 |
486 |
73.5 |
87.4 |
| Symbols: UBP13 | ubiquitin-specific protease 13 | chr3:3761758-3770290 REVERSE LENGTH=1114 |
| Medicago |
Medtr3g079840.1 |
603 |
93.7 |
95.6 |
| ubiquitin carboxyl-terminal hydrolase-like protein | HC | chr3:36048639-36064377 | 20130731 |
| Soybean |
Glyma20g11330.1 |
605 |
93.4 |
95.9 |
|
| LJGI |
gnl|LJGI|AV420019 |
218 |
88.6 |
88.6 |
similar to UniRef100_A7PGA4 Cluster: Chromosome chr6 scaffold_15, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_15, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1055600.1 |
length: 331 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR24619 |
FAMILY |
1.5e-126 |
15-256 |
| HMMPanther |
PTHR24619:SF9 |
SUBFAMILY |
1.5e-126 |
15-256 |
- Wolf-PSORT
Lj6g3v1055600.1 cyto 8.5, cyto_E.R. 5.33333, E.R._vacu 1.33333, chlo 1, nucl 1, extr 1, E.R. 1, cysk 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1055600.1 |
|