Miyakogusa Predicted Gene

Lj6g3v1052260.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L326_SOYBN 193 71.2 80.6 (tr|K7L326) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G08000.1 147 65.5 77.6 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:2555034-2555829 REVERSE LENGTH=143
Medicago Medtr3g080130.1 174 84.0 94.0 | RNA-binding (RRM/RBD/RNP motif) family protein | HC | chr3:36253866-36255120 | 20130731
Soybean Glyma07g33790.1 166 81.4 91.8  
LJGI gnl|LJGI|TC67273 821 100.0 100.0 similar to UniRef100_A7PX80 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (88%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1052260.1 length: 136 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 1.1e-22 39-109
HMMSmart SM00360 RNA 1.3e-28 38-111
ProfileScan PS50102 RRM 21.310 37-115
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 6.7e-36 25-117
no_ID  
HMMPanther PTHR24012 FAMILY 2e-43 36-118
HMMPanther PTHR24012:SF30 SUBFAMILY 2e-43 36-118
Seg seg seg NA 26-36
superfamily SSF54928 RNA-binding 1.7e-30 27-133
Wolf-PSORT
Lj6g3v1052260.1	chlo 12, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1052260.1