Miyakogusa Predicted Gene

Lj6g3v1048980.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LVX1_SOYBN 284 52.6 60.9 (tr|I1LVX1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G28050.1 228 46.0 56.5 | Symbols: TET7 | tetraspanin7 | chr4:13942566-13943621 REVERSE LENGTH=263
Medicago Medtr4g129670.1 274 54.5 64.9 | tetraspanin family protein | HC | chr4:54041164-54038606 | 20130731
Soybean Glyma04g19880.1 291 58.5 65.6  
LJGI gnl|LJGI|TC76721 1594 100.0 100.0 similar to UniRef100_A7PFH9 Cluster: Chromosome chr11 scaffold_14, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_14, whole genome shotgun sequence - Vitis vinifera (Grape), partial (87%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1048980.1 length: 266 aa.
IPR000301 Tetraspanin
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
FPrintScan PR00259 TMFOUR 1.3e-05 7-30
39-65
66-94
IPR018499 Tetraspanin/Peripherin
Cellular Component GO:0016021 integral to membrane    
HMMPfam PF00335 Tetraspannin 2.3e-35 6-258
IPR018503 Tetraspanin, conserved site
Cellular Component GO:0016021 integral to membrane    
PatternScan PS00421 TM4_1 NA 50-72
no_ID  
HMMPanther PTHR32191 FAMILY 2.1e-154 2-263
HMMPanther PTHR32191:SF6 SUBFAMILY 2.1e-154 2-263
Seg seg seg NA 6-24
48-64
70-97
234-248
Wolf-PSORT
Lj6g3v1048980.1	plas 7, golg 4, E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1048980.1 Not targeted -29.862 -0.036 -10.740 30.22% -19.086