Miyakogusa Predicted Gene

Lj6g3v1048880.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7KWP8_SOYBN 313 65.6 70.4 (tr|K7KWP8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G16060.1 168 42.5 52.8 | Symbols: ADAP | ARIA-interacting double AP2 domain protein | chr1:5508563-5511609 FORWARD LENGTH=345
Medicago Medtr2g460730.1 275 59.4 67.4 | AP2-type transcription factor | HC | chr2:25049516-25052612 | 20130731
Soybean Glyma06g30840.1 294 65.2 69.7  
LJGI gnl|LJGI|TC75721 149 82.8 82.8 similar to UniRef100_Q94AN4 Cluster: AP2-like ethylene-responsive transcription factor At1g16060; n=1; Arabidopsis thaliana|Rep: AP2-like ethylene-responsive transcription factor At1g16060 - Arabidopsis thaliana (Mouse-ear cress), partial (57%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1048880.1 length: 256 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Gene3D G3DSA:3.30.730.10 no description 5.4e-17 26-85
HMMPfam PF00847 AP2 5.2e-14 25-76
HMMSmart SM00380 DNA-binding 1.2e-24 26-90
ProfileScan PS51032 AP2_ERF 18.334 26-84
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 3e-20 25-87
no_ID  
HMMPanther PTHR32467 FAMILY 7.9e-62 1-193
HMMPanther PTHR32467:SF0 SUBFAMILY 7.9e-62 1-193
Seg seg seg NA 56-67
138-155
Wolf-PSORT
Lj6g3v1048880.1	nucl 11, nucl_plas 7, cyto 1, mito 1, plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1048880.1