Miyakogusa Predicted Gene

Lj6g3v1038760.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5XS66_PRUPE 605 49.6 66.1 (tr|M5XS66) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020455mg PE=4 SV=1
TAIR_pep AT4G18750.1 426 34.8 52.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) superfamily protein | chr4:10304850-10307465 FORWARD LENGTH=871
Medicago Medtr8g086560.1 427 34.2 52.6 | PPR containing plant protein | HC | chr8:35911406-35914374 | 20130731
Soybean Glyma15g09120.1 430 36.6 53.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1038760.1 length: 772 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.11 168-196
268-297
445-470
473-501
HMMPfam PF13041 PPR_2 2.8e-09 368-416
HMMPfam PF13812 PPR_3 0.65 343-366
HMMTigr TIGR00756 PPR: 2.9e-05 268-298
371-405
ProfileScan PS51375 PPR 8.199 64-98
165-199
266-300
235-265
369-404
338-368
303-337
471-505
440-470
405-439
507-537
604-638
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.5e-06 567-608
no_ID  
HMMPanther PTHR24015 FAMILY 1.6e-207 17-772
HMMPfam PF14432 DYW_deaminase 2.4e-12 657-762
Seg seg seg NA 9-53
97-108
194-212
Wolf-PSORT
Lj6g3v1038760.1	chlo 10, nucl 1, plas 1, extr 1, vacu 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1038760.1