Miyakogusa Predicted Gene

Lj6g3v1028540.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N1Q0_SOYBN 1543 81.0 87.4 (tr|K7N1Q0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G27040.2 1304 70.6 82.9 | Symbols: AGO4 | Argonaute family protein | chr2:11536795-11541503 REVERSE LENGTH=924
Medicago Medtr3g078647.1 1526 83.6 90.1 | eukaryotic translation initiation factor 2c, putative | HC | chr3:35462504-35470692 | 20130731
Soybean Glyma20g12070.2 1541 81.0 87.4  
LJGI gnl|LJGI|TC68652 1626 100.0 100.0 similar to UniRef100_Q2LFC1 Cluster: AGO4-2; n=1; Nicotiana benthamiana|Rep: AGO4-2 - Nicotiana benthamiana, partial (25%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1028540.1 length: 921 aa.
IPR003100 Argonaute/Dicer protein, PAZ
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF02170 PAZ 8.8e-29 292-426
ProfileScan PS50821 PAZ 10.459 315-404
superfamily SSF101690 PAZ 3.4e-44 285-445
IPR003165 Stem cell self-renewal protein Piwi
Molecular Function GO:0005515 protein binding    
HMMPfam PF02171 Piwi 1.9e-99 575-882
HMMSmart SM00950 no description 1.2e-113 574-882
ProfileScan PS50822 PIWI 42.704 574-882
IPR012337 Ribonuclease H-like domain
Molecular Function GO:0003676 nucleic acid binding    
superfamily SSF53098 Ribonuclease 1.1e-77 557-887
IPR014811 Domain of unknown function DUF1785
HMMPfam PF08699 DUF1785 1.8e-18 239-290
no_ID  
Gene3D G3DSA:2.170.260.10 no description 2.2e-28 289-410
Gene3D G3DSA:3.30.420.10 no description 2.6e-20 649-887
Gene3D G3DSA:3.40.50.2300 no description 3.5e-12 463-629
HMMPanther PTHR22891 EUKARYOTIC 0 15-921
HMMPanther PTHR22891:SF0 SUBFAMILY 0 15-921
Seg seg seg NA 14-52
630-646
890-901
Wolf-PSORT
Lj6g3v1028540.1	nucl 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1028540.1