Miyakogusa Predicted Gene
- Lj6g3v1028520.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
A5AIL4_VITVI |
346 |
62.1 |
75.8 |
(tr|A5AIL4) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002159 PE=4 SV=1 |
| TAIR_pep |
AT1G21280.1 |
89.7 |
28.8 |
51.3 |
| Symbols: | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7447690-7448403 REVERSE LENGTH=237 |
| Medicago |
Medtr1262s0010.1 |
100 |
37.8 |
55.1 |
| hypothetical protein | HC | scaffold1262:34-1511 | 20130731 |
| Soybean |
Glyma01g16600.1 |
434 |
73.8 |
84.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1028520.1 |
length: 308 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14244 |
UBN2_3 |
1.5e-40 |
17-157 |
- Wolf-PSORT
Lj6g3v1028520.1 nucl 5, mito 3, cysk_nucl 3, cyto 2, chlo_mito 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1028520.1 |
|