Miyakogusa Predicted Gene
- Lj6g3v0996840.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LPU9_SOYBN |
158 |
80.2 |
91.2 |
(tr|I1LPU9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G18060.1 |
110 |
61.8 |
76.4 |
| Symbols: | SAUR-like auxin-responsive protein family | chr5:5976030-5976302 FORWARD LENGTH=90 |
| Medicago |
Medtr3g084180.1 |
155 |
77.2 |
87.0 |
| SAUR-like auxin-responsive family protein | HC | chr3:38031558-38031247 | 20130731 |
| Soybean |
Glyma12g03870.1 |
158 |
80.2 |
91.2 |
|
| LJGI |
gnl|LJGI|GO028197 |
291 |
88.2 |
88.2 |
similar to UniRef100_P33083 Cluster: Auxin-induced protein 6B; n=1; Glycine max|Rep: Auxin-induced protein 6B - Glycine max (Soybean), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0996840.1 |
length: 92 aa. |
| IPR003676 |
Auxin responsive SAUR protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02519 |
Auxin_inducible |
1e-31 |
17-89 |
| no_ID |
|
| HMMPanther |
PTHR31929 |
FAMILY |
2.3e-33 |
7-90 |
- Wolf-PSORT
Lj6g3v0996840.1 nucl 6.5, cyto_nucl 4.5, chlo 2, mito 2, chlo_mito 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0996840.1 |
|