Miyakogusa Predicted Gene

Lj6g3v0959410.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A5BRG1_VITVI 298 51.4 61.5 (tr|A5BRG1) Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_006086 PE=4 SV=1
TAIR_pep AT5G12330.4 282 46.4 55.9 | Symbols: LRP1 | Lateral root primordium (LRP) protein-related | chr5:3987677-3989408 REVERSE LENGTH=407
Medicago Medtr5g089750.1 288 50.1 59.2 | lateral root primordium (LRP)-like protein | HC | chr5:39020566-39017917 | 20130731
Soybean Glyma20g04990.1 328 51.3 60.9  
LJGI gnl|LJGI|BW631842 912 99.8 99.8 similar to UniRef100_A8JV30 Cluster: CG34327-PA; n=1; Drosophila melanogaster|Rep: CG34327-PA - Drosophila melanogaster (Fruit fly), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0959410.1 length: 390 aa.
IPR006510 Zinc finger, lateral root primordium type 1
method AccNumber shortName E-value location
HMMTigr TIGR01623 put_zinc_LRP1: 3.9e-26 182-224
IPR006511 Lateral Root Primordium type 1, C-terminal
HMMTigr TIGR01624 LRP1_Cterm: 6.4e-26 292-339
IPR007818 Protein of unknown function DUF702
HMMPfam PF05142 DUF702 8.1e-63 178-341
no_ID  
HMMPanther PTHR31604 FAMILY 2.3e-77 60-382
Seg seg seg NA 35-46
140-145
162-168
234-247
257-272
376-389
Wolf-PSORT
Lj6g3v0959410.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0959410.1